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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THCA cis rs2076028 1 rs5757181 chr22:39013522 JOSD1 chr22:39081549-39096459:- -0.14 -3.68 0.00026 Resting heart rate
THCA cis rs2076028 1 rs5757181 chr22:39013522 LOC646851 chr22:38974125-39052634:- 0.14 3.68 0.000262 Resting heart rate
THCA cis rs2076028 1 rs5757187 chr22:39021522 JOSD1 chr22:39081549-39096459:- 0.15 4.16 3.82E-5 Resting heart rate
THCA cis rs2076028 1 rs5757187 chr22:39021522 LOC646851 chr22:38974125-39052634:- -0.12 -3.34 0.000899 Resting heart rate
THCA cis rs2076028 1 rs5757187 chr22:39021522 TOMM22 chr22:39077954-39080763:+ 0.17 3.87 0.000123 Resting heart rate
THCA cis rs2076028 1 rs5757193 chr22:39034867 JOSD1 chr22:39081549-39096459:- 0.15 3.88 0.00012 Resting heart rate
THCA cis rs2076028 1 rs5757193 chr22:39034867 TOMM22 chr22:39077954-39080763:+ 0.18 3.83 0.000145 Resting heart rate
THCA cis rs2076028 1 rs5757196 chr22:39039855 JOSD1 chr22:39081549-39096459:- -0.15 -3.94 9.33E-5 Resting heart rate
THCA cis rs2076028 1 rs5757196 chr22:39039855 TOMM22 chr22:39077954-39080763:+ -0.16 -3.58 0.000379 Resting heart rate
THCA cis rs2076028 1 rs5757200 chr22:39043491 JOSD1 chr22:39081549-39096459:- -0.15 -3.94 9.33E-5 Resting heart rate
THCA cis rs2076028 1 rs5757200 chr22:39043491 TOMM22 chr22:39077954-39080763:+ -0.16 -3.58 0.000379 Resting heart rate
THCA cis rs2076028 1 rs5757203 chr22:39044152 JOSD1 chr22:39081549-39096459:- -0.15 -3.94 9.33E-5 Resting heart rate
THCA cis rs2076028 1 rs5757203 chr22:39044152 TOMM22 chr22:39077954-39080763:+ -0.16 -3.58 0.000379 Resting heart rate
THCA cis rs2076028 1 rs5757204 chr22:39046700 JOSD1 chr22:39081549-39096459:- -0.15 -3.94 9.33E-5 Resting heart rate
THCA cis rs2076028 1 rs5757204 chr22:39046700 TOMM22 chr22:39077954-39080763:+ -0.16 -3.58 0.000379 Resting heart rate